Kluyveromyces lactis

Kluyveromyces lactis (GCA_000002515.1)

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Overview

Organism information
Name	Kluyveromyces lactis
Taxonomy ID	28985 View in NCBI
Taxonomic Group	Eukaryota (Fungi)

Genome details
Assembly Accession	GCA_000002515.1 View in NCBI
Assembly Name	ASM251v1
Sequencing Level	Complete Genome (haploid)
Source Database	GENBANK

Available G-quadruplexes
Total	454	By regular expression	36	By G4Hunter	418

G-quadruplexes

Identified by regular expression:

An overview of the top 50 largest G-quadruplexes is given here.

Detailed View: All G-quadruplexes

Chromosome/Contig Name	Start	End	Length	Sequence
CR382126.1	1,020,516	1,020,549	33	CCCAAGAATTCCCAGGAATTCCCTGGGAATCCC
CR382126.1	213,782	213,813	31	CCCTTGGAAACCCTGGTAGCCCTGGTAACCC
CR382124.1	1,614,667	1,614,696	29	CCCAAAACCCAACTTCCCCTCTAAAGCCC
CR382123.1	1,396,379	1,396,407	28	CCCTTGTCCGCCCCTCCCCTGGCTCCCC
CR382126.1	1,072,258	1,072,286	28	GGGTGGGGAGTGGGGGGGAGGGGGAGGG
CR382126.1	1,655,984	1,656,012	28	GGGGGAGGGGGAAGGGAAAGGGGGGGGG
CR382122.1	2,448	2,475	27	CCCTCCCTCTCTCTCCCTCTCTCTCCC
CR382122.1	721,318	721,345	27	GGGGGGGGGGGGGGGGGGGGGATGGGG
CR382122.1	1,215,495	1,215,522	27	CCCCCCCCGTCCCCCGCTTCCTCCCCC
CR382124.1	2,409	2,436	27	CCCTCCCTCTCTCTCCCTCTCTCTCCC
CR382125.1	1,852,047	1,852,074	27	GGGGGGGGGGGGGGGGGTAGCTTTGGG
CR382124.1	778,167	778,193	26	GGGGGAGAGGGACTGGGGAAAAAGGG
CR382125.1	125,569	125,595	26	CCCGGTCGCCCCTCTGGTTCCCCCCC
CR382125.1	1,711,663	1,711,689	26	CCCGGACTTGCCCACCCTGATATCCC
CR382124.1	412,409	412,434	25	CCCACCAGGCCCACCAGGCCCTCCC
CR382121.1	1,195	1,219	24	CCCATCTCCCGCTTCCCATCTCCC
CR382123.1	1,007	1,031	24	CCCATCTCCCGCTTCCCATCTCCC
CR382123.1	500,088	500,112	24	GGGGCAAAGGGAAGGGGCAGGGGG
CR382123.1	1,313,330	1,313,354	24	CCCCCACCCCCACCCCCTCCCCCC
CR382123.1	1,752,734	1,752,758	24	GGGAAGCGGGAGATGGGAAGCGGG
CR382124.1	1,136	1,160	24	CCCATCTCCCGCTTCCCATCTCCC
CR382124.1	1,714,335	1,714,359	24	GGGAAGCGGGAGATGGGAAGCGGG
CR382125.1	1,088	1,112	24	CCCATCTCCCGCTTCCCATCTCCC
CR382126.1	880	904	24	CCCATCTCCCGCTTCCCATCTCCC
CR382126.1	1,961,819	1,961,843	24	GGGAATAGGGGCGGGACATTTGGG
CR382126.1	2,600,845	2,600,869	24	GGGAAGCGGGAGATGGGAAGCGGG
CR382122.1	696,238	696,261	23	GGGGATGGGAAGGGAAACCAGGG
CR382121.1	242,454	242,476	22	CCCCCCCCCCCCCCCCCCCCCC
CR382122.1	1,055,210	1,055,232	22	CCCTGCTTTACCCACCCCTCCC
CR382122.1	1,103,183	1,103,205	22	GGGAAGGGGGGGGGGGGGGGGG
CR382123.1	997,783	997,805	22	GGGGTGGGGGTGTGGGTGTGGG
CR382126.1	1,713,047	1,713,069	22	CCCCAACCCCAACCCCAACCCC
CR382123.1	135,938	135,959	21	GGGCAAGGGCAAGGGCAAGGG
CR382122.1	437,415	437,435	20	GGGTGGGTGGGTCGGAAGGG
CR382122.1	741,564	741,583	19	GGGATGGGGGGGGGGGGGG
CR382123.1	500,288	500,306	18	CCCTGTCCCTGCCCCCCC

Identified by G4Hunter:

An overview of the top 50 largest G-quadruplexes is given here.

Detailed View: All G-quadruplexes

Chromosome/Contig Name	Start	End	Length	Score	Sequence
CR382126.1	1,713,030	1,713,087	57	-1.68	CTCAGCCTCTTCCTCCACCCCAACCCCAACCCCAACCCCAACCCCAAGCTCAAGCTC
CR382126.1	1,655,969	1,656,023	54	1.57	ttattttttttggttggGGGAGGGGGAAGGGAAAGGGGGGGGGTGGAACCCAGT
CR382122.1	721,303	721,356	53	1.68	AATGACATTATTATcgggggggggggggggggggggaTGGGGAGCTCTTACCC
CR382125.1	705,477	705,529	52	1.6	TTTACACGGATGAGGGGACAGGGGGAGGGGAGAACAGTGGGGCAGGGATGGA
CR382121.1	242,440	242,492	52	-1.71	AATTTGCTTTGTTtcccccccccccccccccccccctTAACTGCTCTCAGTA
CR382122.1	1,215,481	1,215,533	52	-1.69	TGCCTTGCATTACTCCCCCCCCGTCCCCCGCTTCCTCCCCCGCTTCCTCCTC
CR382123.1	198,444	198,496	52	1.69	GATGGAAATGGTGGAGGTGGGGGAGGGGGAGGAGGAGGGGGAGGAGCAATAC
CR382126.1	1,072,248	1,072,299	51	1.63	AAAGACAAACGGGTGGGGAGTGGGGGGGAGGGGGAGGGAACAGTGATAAAA
CR382122.1	1,103,170	1,103,221	51	1.65	ATTCGACTGAGGTGGGAagggggggggggggggggattggtcacgtgacat
CR382123.1	500,080	500,131	51	1.53	ttctttttggGGCAAAGGGAAGGGGCAGGGGGCAGGAGGGCAGGGTAAGAC
CR382123.1	1,313,316	1,313,367	51	-1.55	tgatctttttacAACCCCCACCCCCACCCCCTCCCCCCTTTGGAGAAAGAA
CR382125.1	1,852,033	1,852,082	49	1.53	TGTTGATCCATAAcgggggggggggggggggtAGCTTTGGGTATGTAAT
CR382122.1	539,671	539,720	49	-1.53	TCCTGCACCTCCTGCCCCTCCTGCCCCTCCGGCCCCACCTACTCCTTCC
CR382124.1	198,685	198,734	49	-1.49	AACCCACCCTTCGCTTCTGCCCCTCCCCCGCCCCAATCAGAGGCCGCCA
CR382125.1	76,107	76,156	49	1.55	TAGTTTTAAGGGGAATGAGAGGGGGGGGGGTAAATAATTTGGGGTGAAA
CR382123.1	997,766	997,813	47	1.49	TGAGATGAGGTGGATGTGGGGTGGGGGTGTGGGTGTGGGTAGATGAA
CR382125.1	1,383,176	1,383,221	45	1.29	TTGTGCGTGTTTGTAaggggggggggggggtCATTAGATCATTCA
CR382122.1	741,552	741,597	45	1.36	CACAAGACGAATGGGAtggggggggggggggtCTGTCACTATATC
CR382122.1	874,260	874,305	45	1.29	TATCAGTATCGTGGGGAATGGGGGGAAGGGGAGAATTAATATGAT
CR382126.1	1,283,740	1,283,785	45	-1.31	ACGCTCCCAAACTGGATCCCCCCCCTCCTCCCCGTTACAGTACTA
CR382126.1	1,631,800	1,631,845	45	1.36	TAGGATAATCTTTTTTGGGGGGGGGGGGGAGACTACGGCGGCGAA
CR382121.1	242,127	242,171	44	-1.2	TCGTCCATCTCTTCTGTCCCCCCCCTCCCCCGGTTTCGGACATC
CR382122.1	790,176	790,220	44	-1.18	TGTTTGGCTGCCCGTGCCCCCCCCCCGTTCCAACCGTACCAAAA
CR382126.1	1,252,561	1,252,605	44	-1.23	GTTCTTATTCCATGCCACCCCCCCCCCCCACTGTTACGTATGTT
CR382122.1	154,796	154,839	43	-1.28	TTCAATAAATTCCTCTCCCCCTCCCCCCACCCTTGCAAGGAAT
CR382122.1	695,989	696,032	43	-1.42	GGGTAACCCGCCCCTCTCCCCCCTCGTTACCGATTCCCCTCTC
CR382123.1	522,813	522,856	43	1.14	ACGACAAGGGAAAAGAGAGGGGGGGGAAGTGGagatgaaaata
CR382123.1	1,396,372	1,396,415	43	-1.3	TGTTCTTCCCTTGTCCGCCCCTCCCCTGGCTCCCCAAAATCAG
CR382123.1	1,489,771	1,489,814	43	-1.23	CCGCCATTGCTCTCCACTCCCCCCCCGCTTTCTATTCCTCCGT
CR382121.1	493,448	493,490	42	1.26	TTCAGCTGTAGGTAAGGGGGGAGGGGGGGaatttttctcttc
CR382121.1	827,093	827,135	42	-1.12	ATATATGTACTAATACCCCCCCCCCCACCTTCTTAGTCAGAG
CR382122.1	795,085	795,127	42	1.24	tttagGTTGGTGAAGCGGGGGCGGGGGAGAGCTGTTAGAGAT
CR382126.1	1,250,181	1,250,223	42	1.07	CACGTTTTATTATATGGGGGGGGGGAAGGAACGACGGTACAT
CR382126.1	2,278,393	2,278,435	42	-1.17	AATcgattttcttttcccCCCCCCCCCCTAATTCTGGGccta
CR382123.1	1,701,499	1,701,541	42	1.29	TAGTTGGCGAAGGCGGGAGGGGGAGGGGTTGATTGTAAAAAC
CR382124.1	379,448	379,490	42	-1.1	ATTCTTCATCGGTCTCCCCCCCCCCctaatctttctttttta
CR382124.1	736,218	736,260	42	-1.26	TCCCGCGGAAATACCACCCCTCCCCTCCCTACGACTTCTCTT
CR382123.1	436,023	436,064	41	-1.24	CTCAGCCATCGGCCCTCCCCAGCCCCAGCTTCCACCACAAA
CR382123.1	1,210,748	1,210,789	41	-1.15	TTTAATTTAATCTCTCCCCCCTCCCCCCATTGAATTTGAGT
CR382123.1	1,605,486	1,605,527	41	-1.12	GTTTACTATTGTCTCCCCCGCCCCCCTGAAAATACCATGAC
CR382124.1	1,209,091	1,209,132	41	-1.15	ATTAACACACTGCATCCCCCTCCCCCCACTCGAACTGTGCG
CR382125.1	1,402,555	1,402,595	40	1.32	GACGGGTGCTTATAGGGGGATTGGGGGATTACAGGAATTG
CR382121.1	813,597	813,637	40	-1.3	CTACTGCTACTGCCCCTCCCCCTTCCCATCACGTGACCAC
CR382125.1	2,068,905	2,068,945	40	-1.05	TGTAATTTATTACCTCCCCGCCCCCCATAAATTGTTTACA
CR382126.1	1,273,976	1,274,016	40	0.97	GCTCTAGATATTTCTGGGGGGGGGGGCCTTGATGCAACAT
CR382126.1	1,494,353	1,494,393	40	1.3	ATTTCTGTGGACAGGGGCGGGGGCGGGGGTCCTCGTCATA
CR382123.1	18,499	18,539	40	-1	GAGAAAGGTCAACACCCCCCCCCCCTTCTAGTGACAGTAC
CR382121.1	389,600	389,639	39	-1.28	agaaagaatctcCCCCACTGCCCCCCCTCAATCATTAAC
CR382121.1	414,585	414,624	39	-0.97	TGTAGGATTTACGCCCCCCCCCCCGATCTGCACTTGAGT
CR382121.1	531,690	531,729	39	-1.13	CAGATCTTAAGAACCCCTCCCCACCCTATCAATTCTCAT